J3_3JBP_018
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- AUC*GAGGAAUUUUAAA*UUAAGUU
- Length
- 23 nucleotides
- Bulged bases
- 3JBP|1|AA|A|646, 3JBP|1|AA|U|647, 3JBP|1|AA|U|648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBP|1|AA|A|512
3JBP|1|AA|U|513
3JBP|1|AA|C|514
*
3JBP|1|AA|G|641
3JBP|1|AA|A|642
3JBP|1|AA|G|643
3JBP|1|AA|G|644
3JBP|1|AA|A|645
3JBP|1|AA|A|646
3JBP|1|AA|U|647
3JBP|1|AA|U|648
3JBP|1|AA|U|649
3JBP|1|AA|U|650
3JBP|1|AA|A|651
3JBP|1|AA|A|652
3JBP|1|AA|A|653
*
3JBP|1|AA|U|680
3JBP|1|AA|U|681
3JBP|1|AA|A|682
3JBP|1|AA|A|683
3JBP|1|AA|G|684
3JBP|1|AA|U|685
3JBP|1|AA|U|686
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A2
- 60S ribosomal protein eL28
- Chain A5
- 60S ribosomal protein uL30
- Chain A8
- 60S ribosomal protein eL32
- Chain A9
- 60S ribosomal protein eL33
- Chain AF
- 60S ribosomal protein uL4
- Chain AI
- 60S ribosomal protein eL6
Coloring options: