J3_3JBP_041
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- AUGAAAUAGUAC*GCAAUUAAAUAGUACC*GU
- Length
- 30 nucleotides
- Bulged bases
- 3JBP|1|AA|U|383, 3JBP|1|AA|C|400, 3JBP|1|AA|U|408, 3JBP|1|AA|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBP|1|AA|A|377
3JBP|1|AA|U|378
3JBP|1|AA|G|379
3JBP|1|AA|A|380
3JBP|1|AA|A|381
3JBP|1|AA|A|382
3JBP|1|AA|U|383
3JBP|1|AA|A|384
3JBP|1|AA|G|385
3JBP|1|AA|U|386
3JBP|1|AA|A|387
3JBP|1|AA|C|388
*
3JBP|1|AA|G|399
3JBP|1|AA|C|400
3JBP|1|AA|A|401
3JBP|1|AA|A|402
3JBP|1|AA|U|403
3JBP|1|AA|U|404
3JBP|1|AA|A|405
3JBP|1|AA|A|406
3JBP|1|AA|A|407
3JBP|1|AA|U|408
3JBP|1|AA|A|409
3JBP|1|AA|G|410
3JBP|1|AA|U|411
3JBP|1|AA|A|412
3JBP|1|AA|C|413
3JBP|1|AA|C|414
*
3JBP|1|AC|G|23
3JBP|1|AC|U|24
Current chains
- Chain AA
- 28S ribosomal RNA
- Chain AC
- 5.8S ribosomal RNA
Nearby chains
- Chain AF
- 60S ribosomal protein uL4
- Chain AW
- 60S ribosomal protein uL22
- Chain AZ
- 60S ribosomal protein uL24
- Chain Ae
- 60S ribosomal protein eL39
Coloring options: