J3_3JBU_002

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAG*CAUAACGUCGCAAGACCAAAG*UGC

Length

27 nucleotides

Bulged bases

3JBU|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|142
3JBU|1|A|A|143
3JBU|1|A|G|144
*
3JBU|1|A|C|178
3JBU|1|A|A|179
3JBU|1|A|U|180
3JBU|1|A|A|181
3JBU|1|A|A|182
3JBU|1|A|C|183
3JBU|1|A|G|184
3JBU|1|A|U|185
3JBU|1|A|C|186
3JBU|1|A|G|187
3JBU|1|A|C|188
3JBU|1|A|A|189
3JBU|1|A|A|190
3JBU|1|A|G|191
3JBU|1|A|A|192
3JBU|1|A|C|193
3JBU|1|A|C|194
3JBU|1|A|A|195
3JBU|1|A|A|196
3JBU|1|A|A|197
3JBU|1|A|G|198
*
3JBU|1|A|U|219
3JBU|1|A|G|220
3JBU|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20