J3_3JBU_008

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGAAG*UGUGCC*GGAACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|1002
3JBU|1|A|G|1003
3JBU|1|A|A|1004
3JBU|1|A|A|1005
3JBU|1|A|G|1006
*
3JBU|1|A|U|1023
3JBU|1|A|G|1024
3JBU|1|A|U|1025
3JBU|1|A|G|1026
3JBU|1|A|C|1027
3JBU|1|A|C|1028
*
3JBU|1|A|G|1033
3JBU|1|A|G|1034
3JBU|1|A|A|1035
3JBU|1|A|A|1036
3JBU|1|A|C|1037
3JBU|1|A|C|1038

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14