J3_3JBU_021

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

3JBU|1|b|A|2518, 3JBU|1|b|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|C|2517
3JBU|1|b|A|2518
3JBU|1|b|U|2519
3JBU|1|b|C|2520
*
3JBU|1|b|G|2545
3JBU|1|b|U|2546
3JBU|1|b|A|2547
*
3JBU|1|b|U|2561
3JBU|1|b|U|2562
3JBU|1|b|U|2563
3JBU|1|b|A|2564
3JBU|1|b|A|2565
3JBU|1|b|A|2566
3JBU|1|b|G|2567

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain k

50S ribosomal protein L14