J3_3JBU_030

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CUUGACAUCC*GAGACAG*CUUACG

Length

23 nucleotides

Bulged bases

3JBU|1|A|U|1212, 3JBU|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|C|990
3JBU|1|A|U|991
3JBU|1|A|U|992
3JBU|1|A|G|993
3JBU|1|A|A|994
3JBU|1|A|C|995
3JBU|1|A|A|996
3JBU|1|A|U|997
3JBU|1|A|C|998
3JBU|1|A|C|999
*
3JBU|1|A|G|1041
3JBU|1|A|A|1042
3JBU|1|A|G|1043
3JBU|1|A|A|1044
3JBU|1|A|C|1045
3JBU|1|A|A|1046
3JBU|1|A|G|1047
*
3JBU|1|A|C|1210
3JBU|1|A|U|1211
3JBU|1|A|U|1212
3JBU|1|A|A|1213
3JBU|1|A|C|1214
3JBU|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14