J3_3JBU_041

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CGGAAGAC*GUCAG*CAAG

Length

17 nucleotides

Bulged bases

3JBU|1|b|A|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|C|1298
3JBU|1|b|G|1299
3JBU|1|b|G|1300
3JBU|1|b|A|1301
3JBU|1|b|A|1302
3JBU|1|b|G|1303
3JBU|1|b|A|1304
3JBU|1|b|C|1305
*
3JBU|1|b|G|1623
3JBU|1|b|U|1624
3JBU|1|b|C|1625
3JBU|1|b|A|1626
3JBU|1|b|G|1627
*
3JBU|1|b|C|1639
3JBU|1|b|A|1640
3JBU|1|b|A|1641
3JBU|1|b|G|1642

Current chains

Chain b

23S rRNA

Nearby chains