J3_3JBV_016

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CGGAAGA*UCAG*CAAG

Length

15 nucleotides

Bulged bases

3JBV|1|b|A|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|C|1298
3JBV|1|b|G|1299
3JBV|1|b|G|1300
3JBV|1|b|A|1301
3JBV|1|b|A|1302
3JBV|1|b|G|1303
3JBV|1|b|A|1304
*
3JBV|1|b|U|1624
3JBV|1|b|C|1625
3JBV|1|b|A|1626
3JBV|1|b|G|1627
*
3JBV|1|b|C|1639
3JBV|1|b|A|1640
3JBV|1|b|A|1641
3JBV|1|b|G|1642

Current chains

Chain b

RNA (2903-MER)

Nearby chains