J3_3JBV_031
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CAAUGG*UCGUAGUCCGGAUU*AUGAAGUCG
- Length
- 29 nucleotides
- Bulged bases
- 3JBV|1|A|A|1238, 3JBV|1|A|U|1240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|A|C|1237
3JBV|1|A|A|1238
3JBV|1|A|A|1239
3JBV|1|A|U|1240
3JBV|1|A|G|1241
3JBV|1|A|G|1242
*
3JBV|1|A|U|1295
3JBV|1|A|C|1296
3JBV|1|A|G|1297
3JBV|1|A|U|1298
3JBV|1|A|A|1299
3JBV|1|A|G|1300
3JBV|1|A|U|1301
3JBV|1|A|C|1302
3JBV|1|A|C|1303
3JBV|1|A|G|1304
3JBV|1|A|G|1305
3JBV|1|A|A|1306
3JBV|1|A|U|1307
3JBV|1|A|U|1308
*
3JBV|1|A|A|1329
3JBV|1|A|U|1330
3JBV|1|A|G|1331
3JBV|1|A|A|1332
3JBV|1|A|A|1333
3JBV|1|A|G|1334
3JBV|1|A|U|1335
3JBV|1|A|C|1336
3JBV|1|A|G|1337
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain M
- 30S ribosomal protein S13
- Chain W
- Transfer RNA; tRNA
Coloring options: