J3_3JBV_042
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UGGCAUAAGCCAGCUUGAC*GGUGC*GCAGGUCA
- Length
- 32 nucleotides
- Bulged bases
- 3JBV|1|b|U|2334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|U|2329
3JBV|1|b|G|2330
3JBV|1|b|G|2331
3JBV|1|b|C|2332
3JBV|1|b|A|2333
3JBV|1|b|U|2334
3JBV|1|b|A|2335
3JBV|1|b|A|2336
3JBV|1|b|G|2337
3JBV|1|b|C|2338
3JBV|1|b|C|2339
3JBV|1|b|A|2340
3JBV|1|b|G|2341
3JBV|1|b|C|2342
3JBV|1|b|U|2343
3JBV|1|b|U|2344
3JBV|1|b|G|2345
3JBV|1|b|A|2346
3JBV|1|b|C|2347
*
3JBV|1|b|G|2370
3JBV|1|b|G|2371
3JBV|1|b|U|2372
3JBV|1|b|G|2373
3JBV|1|b|C|2374
*
3JBV|1|b|G|2379
3JBV|1|b|C|2380
3JBV|1|b|A|2381
3JBV|1|b|G|2382
3JBV|1|b|G|2383
3JBV|1|b|U|2384
3JBV|1|b|C|2385
3JBV|1|b|A|2386
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain f
- 50S ribosomal protein L4
- Chain m
- 50S ribosomal protein L16
- Chain o
- 50S ribosomal protein L18
- Chain y
- 50S ribosomal protein L27
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