J3_3JBV_048

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GGAAGUU*AAUGUGCC*GGAACC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|A|G|1002
3JBV|1|A|G|1003
3JBV|1|A|A|1004
3JBV|1|A|A|1005
3JBV|1|A|G|1006
3JBV|1|A|U|1007
3JBV|1|A|U|1008
*
3JBV|1|A|A|1021
3JBV|1|A|A|1022
3JBV|1|A|U|1023
3JBV|1|A|G|1024
3JBV|1|A|U|1025
3JBV|1|A|G|1026
3JBV|1|A|C|1027
3JBV|1|A|C|1028
*
3JBV|1|A|G|1033
3JBV|1|A|G|1034
3JBV|1|A|A|1035
3JBV|1|A|A|1036
3JBV|1|A|C|1037
3JBV|1|A|C|1038

Current chains

Chain A

RNA (1530-MER)

Nearby chains

Chain N

30S ribosomal protein S14