J3_3JCE_040

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGGA*UAC*GGAAU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|a|G|942
3JCE|1|a|U|943
3JCE|1|a|G|944
3JCE|1|a|G|945
3JCE|1|a|A|946
*
3JCE|1|a|U|1235
3JCE|1|a|A|1236
3JCE|1|a|C|1237
*
3JCE|1|a|G|1337
3JCE|1|a|G|1338
3JCE|1|a|A|1339
3JCE|1|a|A|1340
3JCE|1|a|U|1341

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain 9

Transfer RNA; tRNA

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain m

30S ribosomal protein S13