3D structure

PDB id
3JCE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UAUC*GAGACUGC*GAGGAAGGUG
Length
22 nucleotides
Bulged bases
3JCE|1|a|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCE|1|a|U|1116
3JCE|1|a|A|1117
3JCE|1|a|U|1118
3JCE|1|a|C|1119
*
3JCE|1|a|G|1154
3JCE|1|a|A|1155
3JCE|1|a|G|1156
3JCE|1|a|A|1157
3JCE|1|a|C|1158
3JCE|1|a|U|1159
3JCE|1|a|G|1160
3JCE|1|a|C|1161
*
3JCE|1|a|G|1175
3JCE|1|a|A|1176
3JCE|1|a|G|1177
3JCE|1|a|G|1178
3JCE|1|a|A|1179
3JCE|1|a|A|1180
3JCE|1|a|G|1181
3JCE|1|a|G|1182
3JCE|1|a|U|1183
3JCE|1|a|G|1184

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain b
30S ribosomal protein S2
Chain g
30S ribosomal protein S7
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:

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