J3_3JCJ_003

3D structure

PDB id

3JCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAC*GAUAAGC*GAUUUC

Length

16 nucleotides

Bulged bases

3JCJ|1|A|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCJ|1|A|G|55
3JCJ|1|A|A|56
3JCJ|1|A|C|57
*
3JCJ|1|A|G|70
3JCJ|1|A|A|71
3JCJ|1|A|U|72
3JCJ|1|A|A|73
3JCJ|1|A|A|74
3JCJ|1|A|G|75
3JCJ|1|A|C|76
*
3JCJ|1|A|G|110
3JCJ|1|A|A|111
3JCJ|1|A|U|112
3JCJ|1|A|U|113
3JCJ|1|A|U|114
3JCJ|1|A|C|115

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23

Chain X

50S ribosomal protein L29

Chain b

50S ribosomal protein L34