J3_3JCJ_012

3D structure

PDB id

3JCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUC*GUAUG*CAUUUAAAG

Length

18 nucleotides

Bulged bases

3JCJ|1|A|A|2518, 3JCJ|1|A|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCJ|1|A|C|2517
3JCJ|1|A|A|2518
3JCJ|1|A|U|2519
3JCJ|1|A|C|2520
*
3JCJ|1|A|G|2545
3JCJ|1|A|U|2546
3JCJ|1|A|A|2547
3JCJ|1|A|U|2548
3JCJ|1|A|G|2549
*
3JCJ|1|A|C|2559
3JCJ|1|A|A|2560
3JCJ|1|A|U|2561
3JCJ|1|A|U|2562
3JCJ|1|A|U|2563
3JCJ|1|A|A|2564
3JCJ|1|A|A|2565
3JCJ|1|A|A|2566
3JCJ|1|A|G|2567

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain J

50S ribosomal protein L14