3D structure

PDB id
3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GC*GGAAUAUUG*CAGC
Length
15 nucleotides
Bulged bases
3JCJ|1|g|U|368
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCJ|1|g|G|46
3JCJ|1|g|C|47
*
3JCJ|1|g|G|361
3JCJ|1|g|G|362
3JCJ|1|g|A|363
3JCJ|1|g|A|364
3JCJ|1|g|U|365
3JCJ|1|g|A|366
3JCJ|1|g|U|367
3JCJ|1|g|U|368
3JCJ|1|g|G|369
*
3JCJ|1|g|C|392
3JCJ|1|g|A|393
3JCJ|1|g|G|394
3JCJ|1|g|C|395

Current chains

Chain g
16S ribosomal RNA

Nearby chains

Chain f
Translation initiation factor IF-2
Chain t
30S ribosomal protein S12
Chain y
30S ribosomal protein S16

Coloring options:

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