J3_3JCJ_030
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGGA*UUUAAAG*CACU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JCJ_030 not in the Motif Atlas
- Geometric match to J3_8VTW_042
- Geometric discrepancy: 0.2569
- The information below is about J3_8VTW_042
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46457.1
- Basepair signature
- cWW-F-F-F-F-cSS-cWW-F-F-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
3JCJ|1|A|A|1054
3JCJ|1|A|G|1055
3JCJ|1|A|G|1056
3JCJ|1|A|A|1057
*
3JCJ|1|A|U|1081
3JCJ|1|A|U|1082
3JCJ|1|A|U|1083
3JCJ|1|A|A|1084
3JCJ|1|A|A|1085
3JCJ|1|A|A|1086
3JCJ|1|A|G|1087
*
3JCJ|1|A|C|1102
3JCJ|1|A|A|1103
3JCJ|1|A|C|1104
3JCJ|1|A|U|1105
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L11
- Chain d
- 50S ribosomal protein L36
- Chain e
- 50S ribosomal protein L10
Coloring options: