J3_3JCJ_031

3D structure

PDB id

3JCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCGACCCCUAAG*CGAUGGGAAA*UA

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCJ|1|A|U|1344
3JCJ|1|A|C|1345
3JCJ|1|A|G|1346
3JCJ|1|A|A|1347
3JCJ|1|A|C|1348
3JCJ|1|A|C|1349
3JCJ|1|A|C|1350
3JCJ|1|A|C|1351
3JCJ|1|A|U|1352
3JCJ|1|A|A|1353
3JCJ|1|A|A|1354
3JCJ|1|A|G|1355
*
3JCJ|1|A|C|1376
3JCJ|1|A|G|1377
3JCJ|1|A|A|1378
3JCJ|1|A|U|1379
3JCJ|1|A|G|1380
3JCJ|1|A|G|1381
3JCJ|1|A|G|1382
3JCJ|1|A|A|1383
3JCJ|1|A|A|1384
3JCJ|1|A|A|1385
*
3JCJ|1|A|U|1402
3JCJ|1|A|A|1403

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2

Chain S

50S ribosomal protein L23

Chain b

50S ribosomal protein L34