J3_3JCN_021

3D structure

PDB id

3JCN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCN|1|a|G|1003
3JCN|1|a|A|1004
3JCN|1|a|A|1005
3JCN|1|a|G|1006
*
3JCN|1|a|U|1023
3JCN|1|a|G|1024
3JCN|1|a|U|1025
3JCN|1|a|G|1026
3JCN|1|a|C|1027
3JCN|1|a|C|1028
*
3JCN|1|a|G|1033
3JCN|1|a|G|1034
3JCN|1|a|A|1035
3JCN|1|a|A|1036
3JCN|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain q

30S ribosomal protein S14