3D structure

PDB id
3JCN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
UAGAAU*GGAAUACCGGUGG*CGG
Length
22 nucleotides
Bulged bases
3JCN|1|a|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCN|1|a|U|672
3JCN|1|a|A|673
3JCN|1|a|G|674
3JCN|1|a|A|675
3JCN|1|a|A|676
3JCN|1|a|U|677
*
3JCN|1|a|G|713
3JCN|1|a|G|714
3JCN|1|a|A|715
3JCN|1|a|A|716
3JCN|1|a|U|717
3JCN|1|a|A|718
3JCN|1|a|C|719
3JCN|1|a|C|720
3JCN|1|a|G|721
3JCN|1|a|G|722
3JCN|1|a|U|723
3JCN|1|a|G|724
3JCN|1|a|G|725
*
3JCN|1|a|C|732
3JCN|1|a|G|733
3JCN|1|a|G|734

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain i
30S ribosomal protein S6
Chain l
30S ribosomal protein S11
Chain p
30S ribosomal protein S15
Chain u
30S ribosomal protein S18
Chain w
30S ribosomal protein S21

Coloring options:

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