J3_3JCS_001
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGUU*ACAAA*UUAAGCG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|C|113
3JCS|1|1|G|114
3JCS|1|1|U|115
3JCS|1|1|U|116
*
3JCS|1|1|A|152
3JCS|1|1|C|153
3JCS|1|1|A|154
3JCS|1|1|A|155
3JCS|1|1|A|156
*
3JCS|1|1|U|298
3JCS|1|1|U|299
3JCS|1|1|A|300
3JCS|1|1|A|301
3JCS|1|1|G|302
3JCS|1|1|C|303
3JCS|1|1|G|304
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain G
- ribosomal protein L8e
- Chain I
- ribosomal protein L13e
- Chain M
- ribosomal protein L15e
- Chain a
- ribosomal protein L29
- Chain i
- ribosomal protein L36e
Coloring options: