J3_3JCS_016
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UCGGAAAC*GAGAACC*GAA
- Length
- 18 nucleotides
- Bulged bases
- 3JCS|1|1|A|1746
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|U|1633
3JCS|1|1|C|1634
3JCS|1|1|G|1635
3JCS|1|1|G|1636
3JCS|1|1|A|1637
3JCS|1|1|A|1638
3JCS|1|1|A|1639
3JCS|1|1|C|1640
*
3JCS|1|1|G|1742
3JCS|1|1|A|1743
3JCS|1|1|G|1744
3JCS|1|1|A|1745
3JCS|1|1|A|1746
3JCS|1|1|C|1747
3JCS|1|1|C|1748
*
3JCS|1|1|G|1768
3JCS|1|1|A|1769
3JCS|1|1|A|1770
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- 26S gamma ribosomal RNA
- Chain 7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain V
- ribosomal protein L23
- Chain h
- ribosomal protein L34e
- Chain k
- ribosomal protein L38e
- Chain l
- ribosomal protein L39e
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