J3_3JCS_019
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAAAUUCA*UUGAGCCAAAGAAG*CAUUGAG
- Length
- 30 nucleotides
- Bulged bases
- 3JCS|1|1|U|191, 3JCS|1|1|A|246, 3JCS|1|1|G|249, 3JCS|1|1|A|250, 3JCS|1|1|A|251
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|C|185
3JCS|1|1|G|186
3JCS|1|1|A|187
3JCS|1|1|A|188
3JCS|1|1|A|189
3JCS|1|1|U|190
3JCS|1|1|U|191
3JCS|1|1|C|192
3JCS|1|1|A|193
*
3JCS|1|1|U|239
3JCS|1|1|U|240
3JCS|1|1|G|241
3JCS|1|1|A|242
3JCS|1|1|G|243
3JCS|1|1|C|244
3JCS|1|1|C|245
3JCS|1|1|A|246
3JCS|1|1|A|247
3JCS|1|1|A|248
3JCS|1|1|G|249
3JCS|1|1|A|250
3JCS|1|1|A|251
3JCS|1|1|G|252
*
3JCS|1|1|C|262
3JCS|1|1|A|263
3JCS|1|1|U|264
3JCS|1|1|U|265
3JCS|1|1|G|266
3JCS|1|1|A|267
3JCS|1|1|G|268
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- ribosomal protein L4
- Chain W
- ribosomal protein L24
Coloring options: