J3_3LA5_001
3D structure
- PDB id
- 3LA5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray crystal structure of mc6 RNA Riboswitch bound to azacytosine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.7 Å
Loop
- Sequence
- AUAAU*AGCUUCCACC*GACU
- Length
- 19 nucleotides
- Bulged bases
- 3LA5|1|A|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44163.2
- Basepair signature
- cWW-cWS-cWW-F-tWS-F-F-cWW-cWW-cWW-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
3LA5|1|A|A|21
3LA5|1|A|U|22
3LA5|1|A|A|23
3LA5|1|A|A|24
3LA5|1|A|U|25
*
3LA5|1|A|A|45
3LA5|1|A|G|46
3LA5|1|A|C|47
3LA5|1|A|U|48
3LA5|1|A|U|49
3LA5|1|A|C|50
3LA5|1|A|C|51
3LA5|1|A|A|52
3LA5|1|A|C|53
3LA5|1|A|C|54
*
3LA5|1|A|G|72
3LA5|1|A|A|73
3LA5|1|A|C|74
3LA5|1|A|U|75
Current chains
- Chain A
- Adenosine RIboswitch
Nearby chains
No other chains within 10ÅColoring options: