3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
ACGAAG*CGUGAUACAG*CGUACU
Length
22 nucleotides
Bulged bases
3OW2|1|0|U|328
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_3OW2_018 not in the Motif Atlas
Homologous match to J3_4V9F_015
Geometric discrepancy: 0.0357
The information below is about J3_4V9F_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_59706.1
Basepair signature
cWW-F-F-F-cHH-cWW-tHS-F-F-cSW-cWW-tHS-F-cWW
Number of instances in this motif group
1

Unit IDs

3OW2|1|0|A|302
3OW2|1|0|C|303
3OW2|1|0|G|304
3OW2|1|0|A|305
3OW2|1|0|A|306
3OW2|1|0|G|307
*
3OW2|1|0|C|323
3OW2|1|0|G|324
3OW2|1|0|U|325
3OW2|1|0|G|326
3OW2|1|0|A|327
3OW2|1|0|U|328
3OW2|1|0|A|329
3OW2|1|0|C|330
3OW2|1|0|A|331
3OW2|1|0|G|332
*
3OW2|1|0|C|344
3OW2|1|0|G|345
3OW2|1|0|U|346
3OW2|1|0|A|347
3OW2|1|0|C|348
3OW2|1|0|U|349

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain C
50S ribosomal protein L4P
Chain S
50S ribosomal protein L24P

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1064 s