J3_3PIO_018
3D structure
- PDB id
- 3PIO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- CGAGCU*GGCGGAG*CGAGUCCGAAUAGGGCGGCAUUAG
- Length
- 37 nucleotides
- Bulged bases
- 3PIO|1|X|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3PIO|1|X|C|611
3PIO|1|X|G|612
3PIO|1|X|A|613
3PIO|1|X|G|614
3PIO|1|X|C|615
3PIO|1|X|U|616
*
3PIO|1|X|G|633
3PIO|1|X|G|634
3PIO|1|X|C|635
3PIO|1|X|G|636
3PIO|1|X|G|637
3PIO|1|X|A|638
3PIO|1|X|G|639
*
3PIO|1|X|C|646
3PIO|1|X|G|647
3PIO|1|X|A|648
3PIO|1|X|G|649
3PIO|1|X|U|650
3PIO|1|X|C|651
3PIO|1|X|C|652
3PIO|1|X|G|653
3PIO|1|X|A|654
3PIO|1|X|A|655
3PIO|1|X|U|656
3PIO|1|X|A|657
3PIO|1|X|G|658
3PIO|1|X|G|659
3PIO|1|X|G|660
3PIO|1|X|C|661
3PIO|1|X|G|662
3PIO|1|X|G|663
3PIO|1|X|C|664
3PIO|1|X|A|665
3PIO|1|X|U|666
3PIO|1|X|U|667
3PIO|1|X|A|668
3PIO|1|X|G|669
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L4
- Chain I
- 50S ribosomal protein L15
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