J3_4A1B_002

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UAAAC*GAAG*CAAAA

Length

14 nucleotides

Bulged bases

4A1B|1|1|A|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4A1B|1|1|U|436
4A1B|1|1|A|437
4A1B|1|1|A|438
4A1B|1|1|A|439
4A1B|1|1|C|440
*
4A1B|1|1|G|537
4A1B|1|1|A|538
4A1B|1|1|A|539
4A1B|1|1|G|540
*
4A1B|1|1|C|642
4A1B|1|1|A|643
4A1B|1|1|A|644
4A1B|1|1|A|645
4A1B|1|1|A|646

Current chains

Chain 1

26S RRNA

Nearby chains

Chain E

RPL6

Chain H

RPL35A