J3_4A1B_008

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CAUA*UUGCAAUA*UUG

Length

15 nucleotides

Bulged bases

4A1B|1|1|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4A1B|1|1|C|1564
4A1B|1|1|A|1565
4A1B|1|1|U|1566
4A1B|1|1|A|1567
*
4A1B|1|1|U|1578
4A1B|1|1|U|1579
4A1B|1|1|G|1580
4A1B|1|1|C|1581
4A1B|1|1|A|1582
4A1B|1|1|A|1583
4A1B|1|1|U|1584
4A1B|1|1|A|1585
*
4A1B|1|1|U|1606
4A1B|1|1|U|1607
4A1B|1|1|G|1608

Current chains

Chain 1

26S RRNA

Nearby chains

Chain A

RIBOSOMAL PROTEIN L37