J3_4BTS_001
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- AU*AGAAAAU*AGU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_001 not in the Motif Atlas
- Geometric match to J3_4V88_078
- Geometric discrepancy: 0.0812
- The information below is about J3_4V88_078
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.1
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
4BTS|1|AA|A|40
4BTS|1|AA|U|41
*
4BTS|1|AA|A|425
4BTS|1|AA|G|426
4BTS|1|AA|A|427
4BTS|1|AA|A|428
4BTS|1|AA|A|429
4BTS|1|AA|A|430
4BTS|1|AA|U|431
*
4BTS|1|AA|A|456
4BTS|1|AA|G|457
4BTS|1|AA|U|458
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain AD
- 40S RIBOSOMAL PROTEIN RPS9E
- Chain AL
- 40S RIBOSOMAL PROTEIN S12
Coloring options: