J3_4BTS_010
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_010 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.4399
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_99563.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
4BTS|1|AA|U|1255
4BTS|1|AA|C|1256
4BTS|1|AA|U|1257
4BTS|1|AA|U|1258
4BTS|1|AA|A|1259
4BTS|1|AA|G|1260
*
4BTS|1|AA|C|1299
4BTS|1|AA|G|1300
4BTS|1|AA|A|1301
4BTS|1|AA|G|1302
4BTS|1|AA|A|1303
4BTS|1|AA|C|1304
*
4BTS|1|AA|G|1390
4BTS|1|AA|C|1391
4BTS|1|AA|A|1392
4BTS|1|AA|A|1393
4BTS|1|AA|U|1394
4BTS|1|AA|A|1395
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain AC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain AE
- 40S RIBOSOMAL PROTEIN RPS2E
- Chain AI
- 40S RIBOSOMAL PROTEIN RPS16E
- Chain AJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain AN
- 40S RIBOSOMAL PROTEIN RPS29E
- Chain AV
- 40S RIBOSOMAL PROTEIN RPS17E
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