J3_4BTS_013
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAUG*CGUGUUAG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 4BTS|1|AA|U|1444, 4BTS|1|AA|A|1511
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_013 not in the Motif Atlas
- Homologous match to J3_4V88_041
- Geometric discrepancy: 0.2362
- The information below is about J3_4V88_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.3
- Basepair signature
- cWW-cSS-cSH-F-tWH-F-cWW-cSH-F-F-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
4BTS|1|AA|C|1441
4BTS|1|AA|A|1442
4BTS|1|AA|A|1443
4BTS|1|AA|U|1444
4BTS|1|AA|G|1445
*
4BTS|1|AA|C|1505
4BTS|1|AA|G|1506
4BTS|1|AA|U|1507
4BTS|1|AA|G|1508
4BTS|1|AA|U|1509
4BTS|1|AA|U|1510
4BTS|1|AA|A|1511
4BTS|1|AA|G|1512
*
4BTS|1|AA|C|1543
4BTS|1|AA|G|1544
4BTS|1|AA|A|1545
4BTS|1|AA|G|1546
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain A8
- 40S RIBOSOMAL PROTEIN RPS25E
- Chain AG
- 40S RIBOSOMAL PROTEIN RPS5E
- Chain AM
- 40S RIBOSOMAL PROTEIN RPS18E
- Chain AT
- 40S RIBOSOMAL PROTEIN RPS19E
Coloring options: