J3_4BTS_028
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UGA*UAAUA*UA
- Length
- 10 nucleotides
- Bulged bases
- 4BTS|1|CA|U|842
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_028 not in the Motif Atlas
- Geometric match to J3_4V88_080
- Geometric discrepancy: 0.1197
- The information below is about J3_4V88_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.3
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
4BTS|1|CA|U|627
4BTS|1|CA|G|628
4BTS|1|CA|A|629
*
4BTS|1|CA|U|839
4BTS|1|CA|A|840
4BTS|1|CA|A|841
4BTS|1|CA|U|842
4BTS|1|CA|A|843
*
4BTS|1|CA|U|943
4BTS|1|CA|A|944
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain C3
- 40S RIBOSOMAL PROTEIN RPS7E
- Chain C6
- 40S RIBOSOMAL PROTEIN S27
- Chain CH
- 40S RIBOSOMAL PROTEIN RPS22E
- Chain CL
- 40S RIBOSOMAL PROTEIN S12
- Chain CO
- 40S RIBOSOMAL PROTEIN RPS13E
- Chain CQ
- 40S RIBOSOMAL PROTEIN RPS11E
Coloring options: