J3_4BTS_036
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_036 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.4592
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_99563.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
4BTS|1|CA|U|1255
4BTS|1|CA|C|1256
4BTS|1|CA|U|1257
4BTS|1|CA|U|1258
4BTS|1|CA|A|1259
4BTS|1|CA|G|1260
*
4BTS|1|CA|C|1299
4BTS|1|CA|G|1300
4BTS|1|CA|A|1301
4BTS|1|CA|G|1302
4BTS|1|CA|A|1303
4BTS|1|CA|C|1304
*
4BTS|1|CA|G|1390
4BTS|1|CA|C|1391
4BTS|1|CA|A|1392
4BTS|1|CA|A|1393
4BTS|1|CA|U|1394
4BTS|1|CA|A|1395
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain CC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain CE
- 40S RIBOSOMAL PROTEIN RPS2E
- Chain CI
- 40S RIBOSOMAL PROTEIN RPS16E
- Chain CJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain CN
- 40S RIBOSOMAL PROTEIN RPS29E
- Chain CV
- 40S RIBOSOMAL PROTEIN RPS17E
Coloring options: