J3_4CSU_019
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GCA*UCAUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 4CSU|1|B|A|2388, 4CSU|1|B|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4CSU_019 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.2812
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4CSU|1|B|G|2282
4CSU|1|B|C|2283
4CSU|1|B|A|2284
*
4CSU|1|B|U|2384
4CSU|1|B|C|2385
4CSU|1|B|A|2386
4CSU|1|B|U|2387
4CSU|1|B|A|2388
4CSU|1|B|G|2389
4CSU|1|B|U|2390
4CSU|1|B|G|2391
4CSU|1|B|A|2392
4CSU|1|B|U|2393
4CSU|1|B|C|2394
4CSU|1|B|C|2395
*
4CSU|1|B|G|2421
4CSU|1|B|C|2422
4CSU|1|B|U|2423
4CSU|1|B|C|2424
4CSU|1|B|A|2425
4CSU|1|B|A|2426
4CSU|1|B|C|2427
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 4
- 50S RIBOSOMAL PROTEIN L33
- Chain 7
- 50S RIBOSOMAL PROTEIN L35
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain Y
- 50S RIBOSOMAL PROTEIN L27
Coloring options: