J3_4CXE_015

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UUGAAAAG*CGUGAAAC*GUGGAUCA

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|U|371
4CXE|1|2|U|372
4CXE|1|2|G|373
4CXE|1|2|A|374
4CXE|1|2|A|375
4CXE|1|2|A|376
4CXE|1|2|A|377
4CXE|1|2|G|378
*
4CXE|1|2|C|405
4CXE|1|2|G|406
4CXE|1|2|U|407
4CXE|1|2|G|408
4CXE|1|2|A|409
4CXE|1|2|A|410
4CXE|1|2|A|411
4CXE|1|2|C|412
*
4CXE|1|3|G|13
4CXE|1|3|U|14
4CXE|1|3|G|15
4CXE|1|3|G|16
4CXE|1|3|A|17
4CXE|1|3|U|18
4CXE|1|3|C|19
4CXE|1|3|A|20

Current chains

Chain 2

28S RRNA

Chain 3

5.8S RRNA

Nearby chains