J3_4CXE_029

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CUCAG*CGUGGAG*CAAAAG

Length

18 nucleotides

Bulged bases

4CXE|1|2|A|4240, 4CXE|1|2|A|4242

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|4201
4CXE|1|2|U|4202
4CXE|1|2|C|4203
4CXE|1|2|A|4204
4CXE|1|2|G|4205
*
4CXE|1|2|C|4223
4CXE|1|2|G|4224
4CXE|1|2|U|4225
4CXE|1|2|G|4226
4CXE|1|2|G|4227
4CXE|1|2|A|4228
4CXE|1|2|G|4229
*
4CXE|1|2|C|4238
4CXE|1|2|A|4239
4CXE|1|2|A|4240
4CXE|1|2|A|4241
4CXE|1|2|A|4242
4CXE|1|2|G|4243

Current chains

Chain 2

28S RRNA

Nearby chains

Chain 4

5S ribosomal RNA; 5S rRNA