J3_4CXE_031

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CAUUCG*CCUGCUUCUG*CAAG

Length

20 nucleotides

Bulged bases

4CXE|1|2|U|4946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|4925
4CXE|1|2|A|4926
4CXE|1|2|U|4927
4CXE|1|2|U|4928
4CXE|1|2|C|4929
4CXE|1|2|G|4930
*
4CXE|1|2|C|4938
4CXE|1|2|C|4939
4CXE|1|2|U|4940
4CXE|1|2|G|4941
4CXE|1|2|C|4942
4CXE|1|2|U|4943
4CXE|1|2|U|4944
4CXE|1|2|C|4945
4CXE|1|2|U|4946
4CXE|1|2|G|4947
*
4CXE|1|2|C|5014
4CXE|1|2|A|5015
4CXE|1|2|A|5016
4CXE|1|2|G|5017

Current chains

Chain 2

28S RRNA

Nearby chains