3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGUCAG*CGCAACC*GACGACG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4L71_037 not in the Motif Atlas
Homologous match to J3_4LFB_007
Geometric discrepancy: 0.0955
The information below is about J3_4LFB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_08394.3
Basepair signature
cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

4L71|1|XA|C|1063
4L71|1|XA|G|1064
4L71|1|XA|U|1065
4L71|1|XA|C|1066
4L71|1|XA|A|1067
4L71|1|XA|G|1068
*
4L71|1|XA|C|1107
4L71|1|XA|G|1108
4L71|1|XA|C|1109
4L71|1|XA|A|1110
4L71|1|XA|A|1111
4L71|1|XA|C|1112
4L71|1|XA|C|1113
*
4L71|1|XA|G|1187
4L71|1|XA|A|1188
4L71|1|XA|C|1189
4L71|1|XA|G|1190
4L71|1|XA|A|1191
4L71|1|XA|C|1192
4L71|1|XA|G|1193

Current chains

Chain XA
16S Ribosomal RNA

Nearby chains

Chain XB
30S ribosomal protein S2
Chain XC
30S ribosomal protein S3
Chain XE
30S ribosomal protein S5
Chain XG
30S ribosomal protein S7
Chain XI
30S ribosomal protein S9
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14 type Z

Coloring options:


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