3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGC*GGACUGC*GAGGAAGGAG
Length
20 nucleotides
Bulged bases
4LEL|1|QA|A|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4LEL_012 not in the Motif Atlas
Homologous match to J3_4LFB_018
Geometric discrepancy: 0.2582
The information below is about J3_4LFB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17791.2
Basepair signature
cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
Number of instances in this motif group
2

Unit IDs

4LEL|1|QA|C|1116
4LEL|1|QA|G|1117
4LEL|1|QA|C|1118
*
4LEL|1|QA|G|1155
4LEL|1|QA|G|1156
4LEL|1|QA|A|1157
4LEL|1|QA|C|1158
4LEL|1|QA|U|1159
4LEL|1|QA|G|1160
4LEL|1|QA|C|1161
*
4LEL|1|QA|G|1175
4LEL|1|QA|A|1176
4LEL|1|QA|G|1177
4LEL|1|QA|G|1178
4LEL|1|QA|A|1179
4LEL|1|QA|A|1180
4LEL|1|QA|G|1181
4LEL|1|QA|G|1182
4LEL|1|QA|A|1183
4LEL|1|QA|G|1184

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QB
30S ribosomal protein S2
Chain QI
30S ribosomal protein S9
Chain QJ
30S ribosomal protein S10
Chain QN
30S ribosomal protein S14

Coloring options:


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