3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CUC*GAG*UAGAAG
Length
12 nucleotides
Bulged bases
4LEL|1|RA|G|2334, 4LEL|1|RA|A|2336
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4LEL_024 not in the Motif Atlas
Homologous match to J3_7RQB_011
Geometric discrepancy: 0.1245
The information below is about J3_7RQB_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_91491.4
Basepair signature
cWW-F-tWW-tHW-cWW-F-cWW
Number of instances in this motif group
7

Unit IDs

4LEL|1|RA|C|2295
4LEL|1|RA|U|2296
4LEL|1|RA|C|2297
*
4LEL|1|RA|G|2321
4LEL|1|RA|A|2322
4LEL|1|RA|G|2323
*
4LEL|1|RA|U|2332
4LEL|1|RA|A|2333
4LEL|1|RA|G|2334
4LEL|1|RA|A|2335
4LEL|1|RA|A|2336
4LEL|1|RA|G|2337

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QV
Transfer RNA; tRNA
Chain R0
50S ribosomal protein L27
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RG
50S ribosomal protein L5
Chain RS
50S ribosomal protein L18

Coloring options:


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