J3_4LEL_025

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

4LEL|1|RA|A|2518, 4LEL|1|RA|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4LEL_025 not in the Motif Atlas

Homologous match to J3_7RQB_012

Geometric discrepancy: 0.1053

The information below is about J3_7RQB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.3

Basepair signature

cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW

Number of instances in this motif group

4

Unit IDs

4LEL|1|RA|C|2517
4LEL|1|RA|A|2518
4LEL|1|RA|U|2519
4LEL|1|RA|C|2520
*
4LEL|1|RA|G|2545
4LEL|1|RA|U|2546
4LEL|1|RA|U|2547
*
4LEL|1|RA|A|2561
4LEL|1|RA|U|2562
4LEL|1|RA|U|2563
4LEL|1|RA|A|2564
4LEL|1|RA|A|2565
4LEL|1|RA|A|2566
4LEL|1|RA|G|2567

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RO

50S ribosomal protein L14