J3_4LEL_053

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CAC*GGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

4LEL|1|YA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4LEL_053 not in the Motif Atlas

Homologous match to J3_7RQB_013

Geometric discrepancy: 0.3249

The information below is about J3_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_24416.1

Basepair signature

cWW-F-F-tWH-cWW-F-tHS-F-cWW

Number of instances in this motif group

2

Unit IDs

4LEL|1|YA|C|2789
4LEL|1|YA|A|2790
4LEL|1|YA|C|2791
*
4LEL|1|YA|G|2805
4LEL|1|YA|G|2807
4LEL|1|YA|U|2808
4LEL|1|YA|A|2809
4LEL|1|YA|A|2810
4LEL|1|YA|G|2811
*
4LEL|1|YA|C|2889
4LEL|1|YA|G|2891
4LEL|1|YA|A|2892
4LEL|1|YA|G|2893
4LEL|1|YA|G|2894

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3