J3_4LFB_016

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4LFB|1|A|U|1212, 4LFB|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

4LFB|1|A|C|990
4LFB|1|A|U|991
4LFB|1|A|U|992
4LFB|1|A|G|993
4LFB|1|A|A|994
4LFB|1|A|C|995
4LFB|1|A|A|996
4LFB|1|A|U|997
*
4LFB|1|A|A|1044
4LFB|1|A|C|1045
4LFB|1|A|A|1046
4LFB|1|A|G|1047
*
4LFB|1|A|C|1210
4LFB|1|A|U|1211
4LFB|1|A|U|1212
4LFB|1|A|A|1213
4LFB|1|A|C|1214
4LFB|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14