J3_4LFZ_060
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- CCGAAG*CGCCAGAGAG*CGUAGG
- Length
- 22 nucleotides
- Bulged bases
- 4LFZ|1|RA|G|321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4LFZ_060 not in the Motif Atlas
- Geometric match to J3_4V9F_015
- Geometric discrepancy: 0.1429
- The information below is about J3_4V9F_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_59706.1
- Basepair signature
- cWW-F-F-F-cHH-cWW-tHS-F-F-cSW-cWW-tHS-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
4LFZ|1|RA|C|296
4LFZ|1|RA|C|297
4LFZ|1|RA|G|298
4LFZ|1|RA|A|299
4LFZ|1|RA|A|300
4LFZ|1|RA|G|301
*
4LFZ|1|RA|C|316
4LFZ|1|RA|G|317
4LFZ|1|RA|C|318
4LFZ|1|RA|C|319
4LFZ|1|RA|A|320
4LFZ|1|RA|G|321
4LFZ|1|RA|A|322
4LFZ|1|RA|G|323
4LFZ|1|RA|A|324
4LFZ|1|RA|G|325
*
4LFZ|1|RA|C|337
4LFZ|1|RA|G|338
4LFZ|1|RA|U|339
4LFZ|1|RA|A|340
4LFZ|1|RA|G|341
4LFZ|1|RA|G|342
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RF
- 50S ribosomal protein L4
- Chain RY
- 50S ribosomal protein L24
Coloring options: