3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
4LSK|1|XA|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4LSK_036 not in the Motif Atlas
Homologous match to J3_4LFB_005
Geometric discrepancy: 0.1695
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

4LSK|1|XA|C|990
4LSK|1|XA|U|991
4LSK|1|XA|U|992
4LSK|1|XA|G|993
*
4LSK|1|XA|C|1045
4LSK|1|XA|A|1046
4LSK|1|XA|G|1047
*
4LSK|1|XA|C|1210
4LSK|1|XA|U|1211
4LSK|1|XA|U|1212
4LSK|1|XA|A|1213
4LSK|1|XA|C|1214
4LSK|1|XA|G|1215

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XN
30S ribosomal protein S14

Coloring options:


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