J3_4P70_004

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4P70_004 not in the Motif Atlas

Homologous match to J3_4LFB_002

Geometric discrepancy: 0.1087

The information below is about J3_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85722.1

Basepair signature

cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW

Number of instances in this motif group

5

Unit IDs

4P70|1|QA|C|936
4P70|1|QA|A|937
4P70|1|QA|A|938
4P70|1|QA|G|939
*
4P70|1|QA|C|1344
4P70|1|QA|U|1345
4P70|1|QA|A|1346
4P70|1|QA|G|1347
4P70|1|QA|U|1348
4P70|1|QA|A|1349
4P70|1|QA|A|1350
*
4P70|1|QA|U|1372
4P70|1|QA|G|1373
4P70|1|QA|A|1374
4P70|1|QA|A|1375
4P70|1|QA|U|1376
4P70|1|QA|A|1377
4P70|1|QA|C|1378
4P70|1|QA|G|1379

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QG

30S ribosomal protein S7

Chain QI

30S ribosomal protein S9