J3_4P70_022

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UUG*CUAAC*GGACAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4P70_022 not in the Motif Atlas

Homologous match to J3_7RQB_010

Geometric discrepancy: 0.0834

The information below is about J3_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_89368.3

Basepair signature

cWW-tSH-tHW-F-cWW-tHH-cWW

Number of instances in this motif group

3

Unit IDs

4P70|1|RA|U|2091
4P70|1|RA|U|2092
4P70|1|RA|G|2093
*
4P70|1|RA|C|2196
4P70|1|RA|U|2197
4P70|1|RA|A|2198
4P70|1|RA|A|2199
4P70|1|RA|C|2205
*
4P70|1|RA|G|2219
4P70|1|RA|G|2224
4P70|1|RA|A|2225
4P70|1|RA|C|2226
4P70|1|RA|A|2227
4P70|1|RA|G|2228

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RD

50S ribosomal protein L2

Chain RI

50S ribosomal protein L9