J3_4R4V_002

3D structure

PDB id

4R4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the VS ribozyme - G638A mutant

Experimental method

X-RAY DIFFRACTION

Resolution

3.07 Å

Loop

Sequence

GAAC*GG*CACAAGC

Length

13 nucleotides

Bulged bases

4R4V|1|A|A|657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_51910.1

Basepair signature

cWW-F-cWW-tWS-F-F-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4R4V|1|A|G|655
4R4V|1|A|A|656
4R4V|1|A|A|657
4R4V|1|A|C|658
*
4R4V|1|A|G|716
4R4V|1|A|G|717
*
4R4V|1|A|C|758
4R4V|1|A|A|759
4R4V|1|A|C|760
4R4V|1|A|A|761
4R4V|1|A|A|762
4R4V|1|A|G|763
4R4V|1|A|C|764

Current chains

Chain A

VS ribozyme RNA

Nearby chains