J3_4TUB_016
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- UAAAC*GGGUCGUG*CG
- Length
- 15 nucleotides
- Bulged bases
- 4TUB|1|RA|U|288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4TUB_016 not in the Motif Atlas
- Homologous match to J3_7RQB_003
- Geometric discrepancy: 0.0801
- The information below is about J3_7RQB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97921.1
- Basepair signature
- cWW-F-F-tSH-tWH-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4TUB|1|RA|U|258
4TUB|1|RA|A|259
4TUB|1|RA|A|260
4TUB|1|RA|A|261
4TUB|1|RA|C|262
*
4TUB|1|RA|G|282
4TUB|1|RA|G|283
4TUB|1|RA|G|284
4TUB|1|RA|U|285
4TUB|1|RA|C|286
4TUB|1|RA|G|287
4TUB|1|RA|U|288
4TUB|1|RA|G|289
*
4TUB|1|RA|C|396
4TUB|1|RA|G|397
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RI
- 50S ribosomal protein L9
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