J3_4TUE_035

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4TUE_035 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1804

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

4TUE|1|XA|C|990
4TUE|1|XA|U|991
4TUE|1|XA|U|992
4TUE|1|XA|G|993
*
4TUE|1|XA|C|1045
4TUE|1|XA|A|1046
4TUE|1|XA|G|1047
*
4TUE|1|XA|C|1210
4TUE|1|XA|U|1211
4TUE|1|XA|U|1212
4TUE|1|XA|A|1213
4TUE|1|XA|C|1214
4TUE|1|XA|G|1215

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z